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Delicious Pumpkin Cream Cheese Muffins for Cozy Mornings

Published: Aug 26, 2025 by Emma Saviani ·

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The aroma of freshly baked goods fills the air, instantly transporting me to my cozy kitchen sanctuary. Today, I’m excited to share my favorite recipe for Pumpkin Cream Cheese Muffins that perfectly capture the essence of fall and bring a warm, inviting sweetness to any breakfast table. With the comforting flavors of cinnamon and pumpkin, these muffins are not just a treat; they’re a warm hug in pastry form that impresses friends and family alike. Plus, they come together in just 35 minutes, making them an ideal quick bake for anyone craving homemade goodness without the fuss. Trust me, you won't want to miss the delightful cream cheese surprise hidden in each muffin! Are you ready to elevate your baking game?

Pumpkin Cream Cheese Muffins

Why are these muffins a must-try?

Irresistible Flavor: The blend of pumpkin and cream cheese creates an exquisite balance that will have your taste buds dancing.

Quick & Easy: With a total time of just 35 minutes, you can whip up a batch in no time, perfect for busy mornings!

Perfectly Moist: The pumpkin puree ensures each muffin remains moist and tender, making them a delightful treat any time of day.

Crowd-Pleaser: Ideal for brunches, gatherings, or cozy family breakfasts, these muffins will impress everyone. Serve them warm with a side of coffee or hot apple cider for a truly comforting experience!

Storage Made Simple: Easily store these treats for later enjoyment. They last up to three days at room temperature and can even be frozen for up to three months. So, why not make a double batch? You can enjoy these delicious muffins any time the craving hits!

Pumpkin Cream Cheese Muffin Ingredients

For the Muffins

  • All-purpose flour – This forms the base and gives structure to the muffins.
  • Granulated sugar – Adds sweetness and helps create a lovely golden crust.
  • Baking powder – Provides the lift that keeps these muffins fluffy and light.
  • Baking soda – Works alongside the acid in pumpkin to help the muffins rise.
  • Ground cinnamon – Adds warmth and enhances the cozy flavor profile of the muffins.
  • Ground nutmeg – Brings a hint of spice that perfectly complements the pumpkin.
  • Salt – Enhances the overall flavor, balancing sweetness and spice.
  • Pumpkin puree – The star of the show, providing moistness and that delicious pumpkin flavor!
  • Vegetable oil – Keeps the muffins moist and tender without overpowering any flavors.
  • Large eggs – Bind the ingredients and add richness to the batter.
  • Vanilla extract – Infuses a warm, sweet aroma that rounds out the flavors beautifully.

For the Cream Cheese Filling

  • Cream cheese – Adds a rich, creamy center that surprises with every bite.
  • Powdered sugar – Sweetens the cream cheese filling to perfection, enhancing the overall taste.
  • Vanilla extract – Reinforces the lovely warm notes in the cream cheese filling.

These Pumpkin Cream Cheese Muffins are sure to become a cherished recipe, perfect for any occasion!

Step‑by‑Step Instructions for Pumpkin Cream Cheese Muffins

Step 1: Preheat the Oven
Start by preheating your oven to 350°F (175°C). While the oven warms up, prepare a muffin pan by either lining it with paper liners or greasing it thoroughly with non-stick spray. This step ensures your Pumpkin Cream Cheese Muffins come out perfectly and prevents sticking.

Step 2: Prepare the Cream Cheese Filling
In a medium bowl, combine the softened cream cheese, powdered sugar, and 1 teaspoon of vanilla extract. Using a hand mixer or a sturdy spatula, mix until the mixture is smooth and creamy with no lumps. Set this delightful filling aside to allow the flavors to meld while you work on the muffin batter.

Step 3: Mix the Dry Ingredients
In a large mixing bowl, whisk together the all-purpose flour, granulated sugar, baking powder, baking soda, ground cinnamon, ground nutmeg, and salt. Make sure to mix thoroughly until the dry ingredients are well combined. This step guarantees a uniform texture for your Pumpkin Cream Cheese Muffins, contributing to their lightness.

Step 4: Combine the Wet Ingredients
In another bowl, blend the pumpkin puree, vegetable oil, eggs, and remaining teaspoon of vanilla extract. Whisk until the mixture is smooth and well-integrated. Once ready, pour this enticing blend into the bowl with the dry ingredients, mixing briefly to combine. Remember, don’t overmix—some lumps in the batter are perfectly fine!

Step 5: Fill the Muffin Cups
Spoon the muffin batter into the prepared muffin pan, filling each cup about two-thirds full. Carefully dollop 1 tablespoon of the cream cheese filling in the center of each muffin, then cover it gently with more batter to encapsulate that creamy surprise. This layering technique will keep the filling wonderfully moist during baking.

Step 6: Bake the Muffins
Slide the muffin pan into your preheated oven and bake for 18-22 minutes. Keep an eye on them; the muffins are done when they turn golden brown on top, and a toothpick inserted into the center comes out clean. This is when your home will fill with the delicious aroma of Pumpkin Cream Cheese Muffins!

Step 7: Cool and Serve
Once baked, remove the muffins from the oven and let them cool in the pan for about 5 minutes. This cooling period will make them easier to handle. After the initial cooling, transfer the muffins to a wire rack to cool completely. They’re now ready to be enjoyed warm or at room temperature!

Pumpkin Cream Cheese Muffins

Pumpkin Cream Cheese Muffins Variations

Feel free to play around with these muffins to suit your taste buds or dietary needs!

  • Gluten-Free: Substitute all-purpose flour with a 1:1 gluten-free flour blend to make these muffins friendly for gluten-sensitive folks.
  • Add-ins: Stir in ½ cup of chocolate chips or chopped nuts for added texture and flavor. Chocolate pairs wonderfully with pumpkin!
  • Dairy-Free: Use a dairy-free cream cheese alternative and coconut milk instead of regular milk for a completely dairy-free muffin.
  • Spice It Up: Enhance the flavor profile by adding ¼ teaspoon of ground ginger or a pinch of cloves for an extra spice kick.
  • Maple Sweetened: Replace granulated sugar with pure maple syrup for a delightful twist. Adjust the liquid ingredients slightly, as syrup adds moisture!
  • Pumpkin Spice Latte Twist: Add 1 tablespoon of instant coffee granules for a subtle coffee flavor that blends perfectly with pumpkin.
  • Fruit Infusion: Mix in ½ cup of mashed ripe banana or applesauce for a moist and fruity variation packed with extra nutrients.
  • Nutty Crumble Topping: Create a crunchy topping by mixing ¼ cup of oats, chopped nuts, and a sprinkle of cinnamon; sprinkle it on top before baking.

Every variation is an opportunity to make these muffins uniquely yours! Enjoy your baking adventure, and remember, these treats are perfect alongside a warm cup of coffee or a soothing tea. If you're looking for more delicious options, you might also explore these delightful muffins or try out other cozy recipes!

Make Ahead Options

These Pumpkin Cream Cheese Muffins are absolutely perfect for meal prep, saving you valuable time during busy mornings! You can prepare the muffin batter and refrigerate it in an airtight container for up to 24 hours before baking. Additionally, you can mix the cream cheese filling and store it in the fridge separately for the same timeframe. When you’re ready to bake, simply fill the muffin tins as directed and pop them into the oven. This way, you’ll enjoy fresh, delicious muffins with minimal effort, just as wonderful as if you made them from scratch on the spot!

How to Store and Freeze Pumpkin Cream Cheese Muffins

Room Temperature: Store in an airtight container at room temperature for up to 3 days to maintain freshness and moisture.

Fridge: If the weather is particularly warm, you can store the muffins in the fridge for up to a week; cover them well to prevent drying out.

Freezer: For longer shelf life, freeze individually wrapped muffins in plastic wrap or a freezer-safe bag for up to 3 months.

Reheating: To enjoy, thaw at room temperature or microwave for 15-20 seconds if frozen; they’ll taste like they just came out of the oven!

What to Serve with Pumpkin Cream Cheese Muffins

There’s nothing quite like the comforting aroma of these muffins wafting through your kitchen, inviting you to savor the moment.

  • Hot Apple Cider: A warm mug of this seasonal favorite enhances the spiced flavors and brings out the coziness of the muffins. Perfect for chilly mornings!

  • Maple Syrup Drizzle: A dash of maple syrup adds a sweet, earthy note that complements the pumpkin’s richness beautifully.

  • Creamy Yogurt: A dollop of vanilla yogurt provides a cool and tangy contrast, creating a delightful balance with every bite.

  • Candied Pecans: The crunchy texture and caramelized sweetness of pecans add a satisfying crunch that enhances the muffin's soft interior.

  • Spiced Tea: A cup of chai or spiced tea enriches the overall experience, mingling with the warm spices of the muffins for pure bliss.

  • Pumpkin Spice Latte: Embrace fall flavors by pairing these muffins with your favorite pumpkin spice latte for a comforting treat any time of day.

  • Chocolate Chip Cookies: For a sweet surprise, serve alongside soft chocolate chip cookies. The chocolate’s richness harmonizes beautifully with the muffins’ creamy filling.

  • Fresh Fruit Salad: Bright, juicy fruits like apples and pears offer a refreshing palate cleanser that balances the dense and spiced flavor of the muffins.

  • Vanilla Ice Cream: For an indulgent dessert, a scoop of vanilla ice cream on the side melts softly, complementing the warm muffins for a cozy treat.

Expert Tips for Pumpkin Cream Cheese Muffins

Mixing Technique: Don’t overmix the batter when combining wet and dry ingredients; a few lumps are okay! This keeps your muffins light and fluffy.

Cream Cheese Swirl: Make sure to cover the cream cheese filling with batter to prevent it from leaking during baking, giving you that delightful surprise in each bite.

Baking Time: Keep an eye on the muffins as they bake! Ovens can vary, so check for doneness a minute or two early to avoid overbaking.

Cooling Tip: Allow the muffins to cool in the pan for 5 minutes before transferring them to a wire rack. This prevents them from becoming soggy.

Storage Secret: Store leftover Pumpkin Cream Cheese Muffins in an airtight container to keep them fresh for up to 3 days, or freeze for future enjoyment!

Pumpkin Cream Cheese Muffins

Pumpkin Cream Cheese Muffins Recipe FAQs

How do I select the best pumpkin puree?
Absolutely! For the best flavor in your Pumpkin Cream Cheese Muffins, I recommend using 100% pure pumpkin puree rather than pumpkin pie filling. Look for cans labeled "pumpkin puree" without any additives. If you're feeling adventurous, you can also roast and puree fresh pumpkins. Just make sure they're ripe and firm, with a smooth skin.

How should I store my muffins?
Very easy! Store your Pumpkin Cream Cheese Muffins in an airtight container at room temperature for up to 3 days. If you live in a warm climate, you can prolong their freshness by refrigerating them for up to a week, just ensure they're covered to prevent them from drying out.

Can I freeze these muffins? How?
Of course, you can! To freeze your Pumpkin Cream Cheese Muffins, let them cool completely after baking. Wrap each muffin individually in plastic wrap, then place them in a freezer-safe zip-top bag. Label the bag with the date and freeze for up to 3 months. When you're ready to enjoy them, simply thaw at room temperature or microwave for 15-20 seconds. They'll taste fresh out of the oven!

What should I do if my muffins turn out dry?
Don’t worry; there’s always a solution! Dry muffins can happen if they’re overbaked or if there isn’t enough moisture in the batter. To troubleshoot, make sure you’re accurately measuring your flour and other dry ingredients. When you mix the wet and dry ingredients, remember: don’t overmix! If you still find your muffins turn out dry, next time, try adding an extra tablespoon of pumpkin puree or a splash of milk to keep the moisture in.

Can my dog eat these muffins?
While it's tempting to share, these Pumpkin Cream Cheese Muffins contain ingredients that may not be suitable for dogs, such as sugar and cream cheese. However, pumpkin itself is great for dogs! You can whip up a dog-friendly batch by excluding sugar and using a dog-safe cream cheese alternative. Always check with your vet before introducing new treats into your pet's diet.

Pumpkin Cream Cheese Muffins

Delicious Pumpkin Cream Cheese Muffins for Cozy Mornings

These Pumpkin Cream Cheese Muffins are a perfect blend of flavors, making them a delightful treat for any breakfast or brunch occasion.
Print Pin Rate
Course: Breakfast & Brunch
Cuisine: American
Keyword: cozy mornings, cream cheese muffins, Fall Baking, muffin recipe, Pumpkin Cream Cheese Muffins, pumpkin muffins
Prep Time: 15 minutes minutes
Cook Time: 20 minutes minutes
Cooling Time: 5 minutes minutes
Total Time: 35 minutes minutes
Servings: 12 muffins
Calories: 200kcal

Equipment

  • Muffin pan
  • Mixing bowls
  • Whisk
  • hand mixer

Ingredients

For the Muffins

  • 2 cups all-purpose flour This forms the base and gives structure to the muffins.
  • 1 cup granulated sugar Adds sweetness and helps create a lovely golden crust.
  • 2 teaspoons baking powder Provides the lift that keeps these muffins fluffy and light.
  • 1 teaspoon baking soda Works alongside the acid in pumpkin to help the muffins rise.
  • 2 teaspoons ground cinnamon Adds warmth and enhances the cozy flavor profile.
  • 1 teaspoon ground nutmeg Brings a hint of spice that perfectly complements the pumpkin.
  • ½ teaspoon salt Enhances the overall flavor, balancing sweetness and spice.
  • 1 cup pumpkin puree The star of the show, providing moistness and flavor.
  • ½ cup vegetable oil Keeps the muffins moist and tender.
  • 2 large eggs Bind the ingredients and add richness.
  • 2 teaspoons vanilla extract Infuses a sweet aroma that rounds out the flavors.

For the Cream Cheese Filling

  • 8 oz cream cheese Adds a rich, creamy center.
  • ¼ cup powdered sugar Sweetens the filling to perfection.
  • 1 teaspoon vanilla extract Reinforces the lovely warm notes.

Instructions

Step-by-Step Instructions for Pumpkin Cream Cheese Muffins

  • Preheat your oven to 350°F (175°C). Prepare a muffin pan by lining it with paper liners or greasing it.
  • In a medium bowl, combine the softened cream cheese, powdered sugar, and 1 teaspoon of vanilla extract. Mix until smooth and creamy.
  • In a large mixing bowl, whisk together the all-purpose flour, granulated sugar, baking powder, baking soda, ground cinnamon, ground nutmeg, and salt.
  • In another bowl, blend the pumpkin puree, vegetable oil, eggs, and remaining teaspoon of vanilla extract. Whisk until smooth.
  • Spoon the muffin batter into the prepared muffin pan, filling each cup two-thirds full. Add 1 tablespoon of cream cheese filling in the center and cover with more batter.
  • Bake for 18-22 minutes until golden brown and a toothpick comes out clean.
  • Cool in the pan for 5 minutes before transferring to a wire rack to cool completely.

Notes

Allow muffins to cool in the pan for 5 minutes before transferring them to a wire rack. Store in an airtight container up to 3 days or freeze for up to 3 months.

Nutrition

Serving: 1muffin | Calories: 200kcal | Carbohydrates: 30g | Protein: 3g | Fat: 8g | Saturated Fat: 2g | Polyunsaturated Fat: 0.5g | Monounsaturated Fat: 5g | Cholesterol: 30mg | Sodium: 150mg | Potassium: 100mg | Fiber: 1g | Sugar: 10g | Vitamin A: 100IU | Vitamin C: 2mg | Calcium: 2mg | Iron: 4mg

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Ellie Monroe

I’m Ellie, a 54-year-old home cook who believes the best recipes come from the heart. At Heavenly Recipe, I share comforting classics, sweet treats, and simple meals that anyone can make, just like the ones passed down through my family.

More about me

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